pycotools3.model.ImportSBML

class pycotools3.model.ImportSBML(sbml_file, copasi_file=None)[source]

Import from sbml file

Accepts an SBML file, converts it to copasi format and reads it into a Model object

__init__(sbml_file, copasi_file=None)[source]
Parameters:
  • sbml_file (str) – path to sbml
  • copasi_file (None, str) – Default is None and pycotools automatically creates a copasi model with the same name as the sbml file. Otherwise, a path to copasi_file.

Methods

__init__(sbml_file[, copasi_file])
param sbml_file:
 path to sbml
convert() Perform conversion using CopasiSE :return:
copasi_filename()
load_model()
convert()[source]

Perform conversion using CopasiSE :return:

Args:

Returns:

copasi_filename()[source]
load_model()[source]